PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Bca_GomC03g10280.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomC03g10490.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomC03g23580.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomC04g30180.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomC05g02830.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomC05g59550.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomC06g25740.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomC06g51880.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomC07g35760.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomC07g41120.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomC07g47380.mRNA2 Flavonoid F3'5'H/CYP75A low borderline
Bca_GomC08g15310.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomC08g58600.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomC08g59460.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomC08g61490.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomC09g06020.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomC09g06030.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomC09g50380.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomC09g50530.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomC09g50720.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomC09g59900.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomC09g60940.mRNA1 Flavonoid F3'5'H/CYP75A medium borderline
Bca_GomB01g00770.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB01g07490.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB01g11020.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB01g30050.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB01g48060.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB01g48110.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB01g48130.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB01g53780.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB02g01110.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB02g07310.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB02g08010.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB02g08580.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB02g19570.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB02g47190.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB02g48350.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB02g51130.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB02g53340.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB02g67480.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB02g67520.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB02g67770.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB02g67830.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB02g67840.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB02g69080.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB02g74100.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB02g76820.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB02g77120.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomB02g82310.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomB02g83380.mRNA1 Flavonoid F3'H/CYP75B low borderline