PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Bca_GomB02g03690.mRNA1 Alkaloid ADC medium pass
Bca_GomB02g102620.mRNA1 Alkaloid ADC medium pass
Bca_GomB02g95820.mRNA1 Alkaloid ADC medium pass
Bca_GomB02g96800.mRNA1 Alkaloid ADC medium pass
Bca_GomB03g28630.mRNA1 Alkaloid ADC medium pass
Bca_GomB03g52750.mRNA1 Alkaloid ADC medium pass
Bca_GomB05g14560.mRNA1 Alkaloid ADC medium pass
Bca_GomB05g14570.mRNA1 Alkaloid ADC medium pass
Bca_GomB05g14580.mRNA1 Alkaloid ADC medium pass
Bca_GomB06g78480.mRNA2 Alkaloid ADC medium pass
Bca_GomC01g07510.mRNA1 Alkaloid ADC medium pass
Bca_GomC01g07520.mRNA1 Alkaloid ADC medium pass
Bca_GomC07g16840.mRNA1 Alkaloid ADC low borderline
Bca_GomB01g01440.mRNA1 Alkaloid BBE medium borderline
Bca_GomB01g10000.mRNA1 Alkaloid BBE medium borderline
Bca_GomB01g10570.mRNA1 Alkaloid BBE medium borderline
Bca_GomB01g10720.mRNA1 Alkaloid BBE medium borderline
Bca_GomB01g76690.mRNA1 Alkaloid BBE medium borderline
Bca_GomB02g106410.mRNA1 Alkaloid BBE medium borderline
Bca_GomB02g36390.mRNA1 Alkaloid BBE medium borderline
Bca_GomB02g36400.mRNA1 Alkaloid BBE medium borderline
Bca_GomB02g60700.mRNA1 Alkaloid BBE medium borderline
Bca_GomB02g60710.mRNA1 Alkaloid BBE medium borderline
Bca_GomB02g60740.mRNA2 Alkaloid BBE medium borderline
Bca_GomB02g60750.mRNA1 Alkaloid BBE medium borderline
Bca_GomB02g60760.mRNA1 Alkaloid BBE medium borderline
Bca_GomB02g73760.mRNA1 Alkaloid BBE medium borderline
Bca_GomB02g73770.mRNA1 Alkaloid BBE medium borderline
Bca_GomB02g73970.mRNA1 Alkaloid BBE medium borderline
Bca_GomB03g25370.mRNA1 Alkaloid BBE medium borderline
Bca_GomB03g30310.mRNA1 Alkaloid BBE medium borderline
Bca_GomB03g31060.mRNA1 Alkaloid BBE medium borderline
Bca_GomB03g44550.mRNA1 Alkaloid BBE medium borderline
Bca_GomB03g44560.mRNA1 Alkaloid BBE medium borderline
Bca_GomB03g44570.mRNA1 Alkaloid BBE medium borderline
Bca_GomB03g44610.mRNA1 Alkaloid BBE medium borderline
Bca_GomB04g10110.mRNA1 Alkaloid BBE medium borderline
Bca_GomB04g26710.mRNA1 Alkaloid BBE medium borderline
Bca_GomB04g26720.mRNA1 Alkaloid BBE medium borderline
Bca_GomB04g26730.mRNA1 Alkaloid BBE medium borderline
Bca_GomB04g26740.mRNA1 Alkaloid BBE medium borderline
Bca_GomB04g26750.mRNA1 Alkaloid BBE medium borderline
Bca_GomB04g32240.mRNA1 Alkaloid BBE medium borderline
Bca_GomB04g32260.mRNA1 Alkaloid BBE medium borderline
Bca_GomB04g32280.mRNA1 Alkaloid BBE medium borderline
Bca_GomB04g45190.mRNA1 Alkaloid BBE medium borderline
Bca_GomB04g50790.mRNA1 Alkaloid BBE medium borderline
Bca_GomB04g50800.mRNA1 Alkaloid BBE medium borderline
Bca_GomB04g56050.mRNA1 Alkaloid BBE medium borderline
Bca_GomB04g56120.mRNA1 Alkaloid BBE medium borderline