PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Bca_GomC01g04130.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC01g20790.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC01g32760.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC01g40130.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC01g48600.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomC01g48620.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomC01g48640.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomC01g48650.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomC02g30630.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomC02g36160.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC02g39840.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC02g40780.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC02g49890.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC02g49940.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC02g52150.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC02g52160.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC03g02880.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomC03g05920.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC03g24290.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomC03g25960.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC03g38490.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC03g39680.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC03g41530.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC03g46810.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC03g50570.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomC03g50580.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomC03g54420.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC03g62280.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC03g68670.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC03g74980.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomC03g81420.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC03g86640.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC03g90110.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC04g37730.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC04g43030.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomC04g56480.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC04g62050.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC04g65090.mRNA2 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC04g65100.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC05g02890.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC05g13210.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomC05g13240.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC05g15220.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC05g15790.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC05g18860.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC05g50970.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomC05g56270.mRNA1 Flavonoid F3'H/CYP75B medium borderline
Bca_GomC06g23050.mRNA2 Flavonoid F3'H/CYP75B low borderline
Bca_GomC06g25610.mRNA1 Flavonoid F3'H/CYP75B low borderline
Bca_GomC06g51150.mRNA1 Flavonoid F3'H/CYP75B medium borderline