PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status Best Target
Bca_GomB01g29610.mRNA1 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
Bca_GomB01g33140.mRNA1 Terpenoid BAHD medium pass BAHD__00003__sp_A0A078H868_GPC1_BRANA
Bca_GomB01g34270.mRNA1 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomB01g35400.mRNA1 Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Bca_GomB01g36580.mRNA1 Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Bca_GomB01g46450.mRNA1 Terpenoid BAHD medium pass BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH
Bca_GomB01g46660.mRNA1 Terpenoid BAHD medium pass BAHD__00058__sp_Q8LG50_LPAT2_ARATH
Bca_GomB01g49220.mRNA1 Terpenoid BAHD medium pass BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Bca_GomB01g51250.mRNA1 Terpenoid BAHD medium pass BAHD__00071__sp_Q9CAY3_GPAT5_ARATH
Bca_GomB01g51790.mRNA1 Terpenoid BAHD medium pass BAHD__00071__sp_Q9CAY3_GPAT5_ARATH
Bca_GomB01g52150.mRNA1 Terpenoid BAHD medium pass BAHD__00071__sp_Q9CAY3_GPAT5_ARATH
Bca_GomB01g52580.mRNA1 Terpenoid BAHD medium pass BAHD__00071__sp_Q9CAY3_GPAT5_ARATH
Bca_GomB01g53730.mRNA1 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomB01g54270.mRNA1 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomB01g55060.mRNA1 Terpenoid BAHD medium pass BAHD__00063__sp_Q93VV0_ZDHC6_ARATH
Bca_GomB01g55850.mRNA1 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
Bca_GomB01g59230.mRNA1 Terpenoid BAHD medium pass BAHD__00037__sp_Q3EBC2_ZDHC5_ARATH
Bca_GomB01g60580.mRNA1 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomB01g62760.mRNA1 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
Bca_GomB01g62920.mRNA1 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
Bca_GomB01g63910.mRNA1 Terpenoid BAHD medium pass BAHD__00037__sp_Q3EBC2_ZDHC5_ARATH
Bca_GomB01g65440.mRNA1 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
Bca_GomB01g66170.mRNA1 Terpenoid BAHD medium pass BAHD__00063__sp_Q93VV0_ZDHC6_ARATH
Bca_GomB01g66770.mRNA1 Terpenoid BAHD medium pass BAHD__00063__sp_Q93VV0_ZDHC6_ARATH
Bca_GomB01g71790.mRNA1 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomB01g71800.mRNA1 Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
Bca_GomB01g73280.mRNA1 Terpenoid BAHD medium pass BAHD__00076__sp_Q9FLM3_ZDH23_ARATH
Bca_GomB01g73320.mRNA1 Terpenoid BAHD medium pass BAHD__00074__sp_Q9FFQ7_FACT_ARATH
Bca_GomB01g74340.mRNA1 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomB01g75760.mRNA1 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Bca_GomB01g75870.mRNA1 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
Bca_GomB02g02380.mRNA1 Terpenoid BAHD medium pass BAHD__00069__sp_Q9C5W0_DGAT3_ARATH
Bca_GomB02g03210.mRNA1 Terpenoid BAHD medium pass BAHD__00038__sp_Q3EC11_ZDHC2_ARATH
Bca_GomB02g04010.mRNA1 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
Bca_GomB02g06350.mRNA1 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
Bca_GomB02g10090.mRNA1 Terpenoid BAHD low borderline BAHD__00069__sp_Q9C5W0_DGAT3_ARATH
Bca_GomB02g10100.mRNA1 Terpenoid BAHD medium pass BAHD__00069__sp_Q9C5W0_DGAT3_ARATH
Bca_GomB02g104700.mRNA1 Terpenoid BAHD medium pass BAHD__00052__sp_Q8GWG0_GPAT9_ARATH
Bca_GomB02g105220.mRNA1 Terpenoid BAHD medium pass BAHD__00052__sp_Q8GWG0_GPAT9_ARATH
Bca_GomB02g11470.mRNA1 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
Bca_GomB02g14860.mRNA1 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Bca_GomB02g18580.mRNA1 Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
Bca_GomB02g18710.mRNA1 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomB02g18720.mRNA1 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
Bca_GomB02g19410.mRNA1 Terpenoid BAHD medium pass BAHD__00028__sp_O80467_SDT_ARATH
Bca_GomB02g19920.mRNA1 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Bca_GomB02g27220.mRNA1 Terpenoid BAHD medium pass BAHD__00066__sp_Q94CK0_WSD7_ARATH
Bca_GomB02g27230.mRNA1 Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
Bca_GomB02g27240.mRNA1 Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
Bca_GomB02g28010.mRNA1 Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH