PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Bca_GomC02g23860.mRNA1 Flavonoid FNS medium borderline
Bca_GomC02g27610.mRNA1 Flavonoid FNS low borderline
Bca_GomC02g49950.mRNA1 Flavonoid FNS medium borderline
Bca_GomC02g56750.mRNA1 Flavonoid FNS medium borderline
Bca_GomC03g06370.mRNA1 Flavonoid FNS medium borderline
Bca_GomC03g10550.mRNA1 Flavonoid FNS medium borderline
Bca_GomC03g21580.mRNA1 Flavonoid FNS low borderline
Bca_GomC03g24320.mRNA1 Flavonoid FNS medium borderline
Bca_GomC03g25850.mRNA1 Flavonoid FNS medium borderline
Bca_GomC03g36530.mRNA1 Flavonoid FNS medium borderline
Bca_GomC03g38290.mRNA1 Flavonoid FNS medium borderline
Bca_GomC03g44950.mRNA1 Flavonoid FNS medium borderline
Bca_GomC03g54380.mRNA1 Flavonoid FNS medium borderline
Bca_GomC03g54400.mRNA1 Flavonoid FNS medium borderline
Bca_GomC03g54410.mRNA1 Flavonoid FNS medium borderline
Bca_GomC03g59830.mRNA1 Flavonoid FNS medium borderline
Bca_GomC03g59840.mRNA1 Flavonoid FNS medium borderline
Bca_GomC03g82050.mRNA1 Flavonoid FNS medium borderline
Bca_GomC03g90930.mRNA1 Flavonoid FNS low borderline
Bca_GomC04g02120.mRNA1 Flavonoid FNS medium borderline
Bca_GomC04g02410.mRNA1 Flavonoid FNS medium borderline
Bca_GomC04g04700.mRNA1 Flavonoid FNS medium borderline
Bca_GomC04g65670.mRNA1 Flavonoid FNS medium borderline
Bca_GomC05g12770.mRNA1 Flavonoid FNS medium borderline
Bca_GomC05g37490.mRNA1 Flavonoid FNS medium borderline
Bca_GomC05g45200.mRNA1 Flavonoid FNS medium borderline
Bca_GomC05g51140.mRNA1 Flavonoid FNS medium borderline
Bca_GomC05g59560.mRNA1 Flavonoid FNS medium borderline
Bca_GomC05g60280.mRNA1 Flavonoid FNS low borderline
Bca_GomC06g00330.mRNA1 Flavonoid FNS medium borderline
Bca_GomC06g05720.mRNA1 Flavonoid FNS low borderline
Bca_GomC07g35290.mRNA1 Flavonoid FNS medium borderline
Bca_GomC07g35840.mRNA1 Flavonoid FNS low borderline
Bca_GomC07g37070.mRNA1 Flavonoid FNS medium borderline
Bca_GomC07g37090.mRNA1 Flavonoid FNS medium borderline
Bca_GomC07g37230.mRNA1 Flavonoid FNS medium borderline
Bca_GomC07g41140.mRNA1 Flavonoid FNS medium borderline
Bca_GomC07g47800.mRNA1 Flavonoid FNS low borderline
Bca_GomC07g60300.mRNA1 Flavonoid FNS medium borderline
Bca_GomC08g04160.mRNA1 Flavonoid FNS medium borderline
Bca_GomC08g12620.mRNA1 Flavonoid FNS medium borderline
Bca_GomC08g23800.mRNA1 Flavonoid FNS medium borderline
Bca_GomC08g33440.mRNA1 Flavonoid FNS low borderline
Bca_GomC08g50210.mRNA1 Flavonoid FNS medium borderline
Bca_GomC08g58370.mRNA1 Flavonoid FNS medium borderline
Bca_GomB01g07360.mRNA1 Flavonoid IFR low borderline
Bca_GomB01g07410.mRNA1 Flavonoid IFR low borderline
Bca_GomB01g07470.mRNA1 Flavonoid IFR low borderline
Bca_GomB01g10990.mRNA1 Flavonoid IFR low borderline
Bca_GomB01g46700.mRNA1 Flavonoid IFR low borderline