PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Bca_GomC08g04950.mRNA1 Alkaloid GS low borderline
Bca_GomC08g04960.mRNA1 Alkaloid GS low borderline
Bca_GomC08g06530.mRNA1 Alkaloid GS low borderline
Bca_GomC08g06540.mRNA1 Alkaloid GS low borderline
Bca_GomC08g06740.mRNA1 Alkaloid GS low borderline
Bca_GomC08g10860.mRNA1 Alkaloid GS low borderline
Bca_GomC08g11600.mRNA1 Alkaloid GS low borderline
Bca_GomC08g20740.mRNA1 Alkaloid GS medium pass
Bca_GomC08g20750.mRNA1 Alkaloid GS low borderline
Bca_GomC08g47080.mRNA1 Alkaloid GS medium pass
Bca_GomC08g50270.mRNA1 Alkaloid GS high pass
Bca_GomC09g11450.mRNA1 Alkaloid GS low borderline
Bca_GomC09g11870.mRNA1 Alkaloid GS low borderline
Bca_GomC09g13680.mRNA1 Alkaloid GS low borderline
Bca_GomC09g33510.mRNA1 Alkaloid GS medium pass
Bca_GomB01g14650.mRNA1 Alkaloid H6H high pass
Bca_GomB01g43280.mRNA1 Alkaloid H6H low borderline
Bca_GomB01g43290.mRNA1 Alkaloid H6H low borderline
Bca_GomB01g50160.mRNA1 Alkaloid H6H low borderline
Bca_GomB01g52780.mRNA1 Alkaloid H6H medium borderline
Bca_GomB01g76840.mRNA1 Alkaloid H6H medium borderline
Bca_GomB02g09410.mRNA1 Alkaloid H6H low borderline
Bca_GomB02g104570.mRNA1 Alkaloid H6H high pass
Bca_GomB02g21010.mRNA1 Alkaloid H6H low borderline
Bca_GomB02g47760.mRNA1 Alkaloid H6H medium borderline
Bca_GomB02g48670.mRNA1 Alkaloid H6H medium borderline
Bca_GomB02g49330.mRNA1 Alkaloid H6H medium borderline
Bca_GomB02g55830.mRNA1 Alkaloid H6H medium borderline
Bca_GomB02g56530.mRNA1 Alkaloid H6H medium pass
Bca_GomB02g57830.mRNA1 Alkaloid H6H medium borderline
Bca_GomB02g77590.mRNA1 Alkaloid H6H low borderline
Bca_GomB02g78710.mRNA1 Alkaloid H6H medium borderline
Bca_GomB02g82070.mRNA1 Alkaloid H6H medium borderline
Bca_GomB02g86830.mRNA1 Alkaloid H6H low borderline
Bca_GomB03g02350.mRNA1 Alkaloid H6H low borderline
Bca_GomB03g03280.mRNA1 Alkaloid H6H low borderline
Bca_GomB03g03750.mRNA1 Alkaloid H6H low borderline
Bca_GomB03g09840.mRNA1 Alkaloid H6H low borderline
Bca_GomB03g10090.mRNA1 Alkaloid H6H low borderline
Bca_GomB03g30250.mRNA1 Alkaloid H6H medium pass
Bca_GomB03g31000.mRNA1 Alkaloid H6H medium pass
Bca_GomB03g52160.mRNA1 Alkaloid H6H low borderline
Bca_GomB03g52170.mRNA1 Alkaloid H6H low borderline
Bca_GomB03g70190.mRNA1 Alkaloid H6H medium borderline
Bca_GomB03g71280.mRNA1 Alkaloid H6H low borderline
Bca_GomB03g71420.mRNA1 Alkaloid H6H medium borderline
Bca_GomB03g89450.mRNA1 Alkaloid H6H low borderline
Bca_GomB03g90750.mRNA1 Alkaloid H6H low borderline
Bca_GomB04g14460.mRNA1 Alkaloid H6H medium borderline
Bca_GomB04g65910.mRNA1 Alkaloid H6H low borderline