PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Bca_GomB08g65640.mRNA1 Rosmarinic Acid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
Bca_GomB08g70810.mRNA1 Rosmarinic Acid 4CL low borderline 4CL__00012__sp_Q84P21_4CLL5_ARATH
Bca_GomB08g77700.mRNA1 Rosmarinic Acid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
Bca_GomC01g17230.mRNA1 Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
Bca_GomC01g22870.mRNA1 Rosmarinic Acid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
Bca_GomC01g47010.mRNA1 Rosmarinic Acid 4CL low borderline 4CL__00018__sp_Q9S777_4CL3_ARATH
Bca_GomC02g10030.mRNA1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Bca_GomC02g30060.mRNA1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Bca_GomC02g33890.mRNA1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Bca_GomC02g39020.mRNA1 Rosmarinic Acid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
Bca_GomC03g00440.mRNA1 Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Bca_GomC03g15210.mRNA1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Bca_GomC03g35590.mRNA1 Rosmarinic Acid 4CL low borderline 4CL__00001__sp_I3PB36_CNL_PETHY
Bca_GomC03g49020.mRNA1 Rosmarinic Acid 4CL low borderline 4CL__00012__sp_Q84P21_4CLL5_ARATH
Bca_GomC03g51480.mRNA1 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Bca_GomC03g53850.mRNA1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Bca_GomC03g55140.mRNA1 Rosmarinic Acid 4CL medium pass 4CL__00015__sp_Q9LU36_4CL4_ARATH
Bca_GomC03g55150.mRNA1 Rosmarinic Acid 4CL medium pass 4CL__00015__sp_Q9LU36_4CL4_ARATH
Bca_GomC03g56700.mRNA1 Rosmarinic Acid 4CL low borderline 4CL__00012__sp_Q84P21_4CLL5_ARATH
Bca_GomC03g95360.mRNA2 Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Bca_GomC04g16990.mRNA1 Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Bca_GomC04g39700.mRNA1 Rosmarinic Acid 4CL low borderline 4CL__00012__sp_Q84P21_4CLL5_ARATH
Bca_GomC04g46690.mRNA1 Rosmarinic Acid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Bca_GomC04g60710.mRNA1 Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Bca_GomC04g60740.mRNA1 Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Bca_GomC04g66070.mRNA1 Rosmarinic Acid 4CL low borderline 4CL__00007__sp_Q42524_4CL1_ARATH
Bca_GomC05g23350.mRNA1 Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Bca_GomC05g23360.mRNA1 Rosmarinic Acid 4CL medium pass 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Bca_GomC05g23370.mRNA1 Rosmarinic Acid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Bca_GomC05g23410.mRNA1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Bca_GomC05g23780.mRNA1 Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
Bca_GomC05g23790.mRNA1 Rosmarinic Acid 4CL medium pass 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Bca_GomC05g23830.mRNA1 Rosmarinic Acid 4CL medium pass 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Bca_GomC05g23840.mRNA1 Rosmarinic Acid 4CL medium pass 4CL__00005__sp_P0C5B6_4CLL4_ARATH
Bca_GomC05g25050.mRNA1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Bca_GomC05g33760.mRNA1 Rosmarinic Acid 4CL low borderline 4CL__00017__sp_Q9S725_4CL2_ARATH
Bca_GomC05g43330.mRNA1 Rosmarinic Acid 4CL medium pass 4CL__00017__sp_Q9S725_4CL2_ARATH
Bca_GomC05g43340.mRNA1 Rosmarinic Acid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
Bca_GomC05g43780.mRNA1 Rosmarinic Acid 4CL medium pass 4CL__00015__sp_Q9LU36_4CL4_ARATH
Bca_GomC05g43790.mRNA1 Rosmarinic Acid 4CL medium pass 4CL__00015__sp_Q9LU36_4CL4_ARATH
Bca_GomC05g44250.mRNA1 Rosmarinic Acid 4CL medium pass 4CL__00015__sp_Q9LU36_4CL4_ARATH
Bca_GomC05g44280.mRNA1 Rosmarinic Acid 4CL medium pass 4CL__00015__sp_Q9LU36_4CL4_ARATH
Bca_GomC05g48350.mRNA1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Bca_GomC05g49170.mRNA1 Rosmarinic Acid 4CL low borderline 4CL__00018__sp_Q9S777_4CL3_ARATH
Bca_GomC06g17800.mRNA1 Rosmarinic Acid 4CL medium pass 4CL__00007__sp_Q42524_4CL1_ARATH
Bca_GomC06g35590.mRNA1 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
Bca_GomC06g43210.mRNA1 Rosmarinic Acid 4CL medium pass 4CL__00018__sp_Q9S777_4CL3_ARATH
Bca_GomC06g43470.mRNA1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Bca_GomC06g55450.mRNA1 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
Bca_GomC07g02590.mRNA1 Rosmarinic Acid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ