PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Bca_GomC08g19070.mRNA1 Alkaloid LAMT low borderline
Bca_GomC08g20340.mRNA1 Alkaloid LAMT medium borderline
Bca_GomC09g08840.mRNA1 Alkaloid LAMT medium borderline
Bca_GomC09g37590.mRNA1 Alkaloid LAMT medium borderline
Bca_GomB01g33360.mRNA1 Alkaloid MPO medium pass
Bca_GomB01g70900.mRNA1 Alkaloid MPO low borderline
Bca_GomB01g78780.mRNA1 Alkaloid MPO high pass
Bca_GomB01g78790.mRNA1 Alkaloid MPO high pass
Bca_GomB02g55700.mRNA1 Alkaloid MPO medium pass
Bca_GomB05g35890.mRNA1 Alkaloid MPO medium pass
Bca_GomB05g70390.mRNA1 Alkaloid MPO medium pass
Bca_GomB05g70430.mRNA1 Alkaloid MPO medium pass
Bca_GomB07g29220.mRNA1 Alkaloid MPO low borderline
Bca_GomB07g29250.mRNA1 Alkaloid MPO medium pass
Bca_GomB07g62500.mRNA1 Alkaloid MPO medium pass
Bca_GomB08g35840.mRNA1 Alkaloid MPO high pass
Bca_GomB08g36160.mRNA1 Alkaloid MPO high pass
Bca_GomC02g38750.mRNA1 Alkaloid MPO medium pass
Bca_GomC02g38770.mRNA1 Alkaloid MPO low borderline
Bca_GomC02g41070.mRNA1 Alkaloid MPO high pass
Bca_GomC03g33010.mRNA1 Alkaloid MPO high pass
Bca_GomC03g92170.mRNA1 Alkaloid MPO medium pass
Bca_GomC04g28470.mRNA1 Alkaloid MPO medium pass
Bca_GomC04g62370.mRNA1 Alkaloid MPO high pass
Bca_GomC06g03110.mRNA1 Alkaloid MPO medium pass
Bca_GomC06g03120.mRNA1 Alkaloid MPO medium pass
Bca_GomC07g16930.mRNA1 Alkaloid MPO medium pass
Bca_GomC08g02930.mRNA1 Alkaloid MPO medium pass
Bca_GomC08g13870.mRNA1 Alkaloid MPO low borderline
Bca_GomB01g50490.mRNA1 Alkaloid NCS medium pass
Bca_GomB02g15410.mRNA1 Alkaloid NCS medium borderline
Bca_GomB02g16450.mRNA1 Alkaloid NCS medium borderline
Bca_GomB02g73580.mRNA1 Alkaloid NCS medium borderline
Bca_GomB03g30090.mRNA2 Alkaloid NCS medium borderline
Bca_GomB03g46020.mRNA1 Alkaloid NCS medium borderline
Bca_GomB03g50510.mRNA1 Alkaloid NCS medium borderline
Bca_GomB03g70200.mRNA1 Alkaloid NCS medium borderline
Bca_GomB05g34310.mRNA2 Alkaloid NCS medium borderline
Bca_GomB05g53900.mRNA1 Alkaloid NCS medium borderline
Bca_GomB05g68400.mRNA1 Alkaloid NCS medium borderline
Bca_GomB06g27320.mRNA1 Alkaloid NCS medium borderline
Bca_GomB06g39450.mRNA1 Alkaloid NCS medium borderline
Bca_GomB06g57660.mRNA1 Alkaloid NCS medium borderline
Bca_GomB06g59110.mRNA1 Alkaloid NCS medium borderline
Bca_GomB06g60020.mRNA1 Alkaloid NCS medium borderline
Bca_GomB07g00310.mRNA1 Alkaloid NCS medium borderline
Bca_GomB07g03370.mRNA1 Alkaloid NCS medium borderline
Bca_GomB07g04000.mRNA1 Alkaloid NCS medium borderline
Bca_GomB07g81310.mRNA1 Alkaloid NCS medium borderline
Bca_GomB08g01040.mRNA1 Alkaloid NCS medium borderline