PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Bca_GomB01g52020.mRNA1 Phenylpropanoid POD low borderline
Bca_GomB01g52060.mRNA1 Phenylpropanoid POD low borderline
Bca_GomB01g52400.mRNA1 Phenylpropanoid POD low borderline
Bca_GomB01g56680.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB01g57330.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB01g57820.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB01g60730.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB01g62590.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB01g65030.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB01g68020.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB01g72460.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB01g74390.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB01g77680.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB01g78360.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g03170.mRNA1 Phenylpropanoid POD low borderline
Bca_GomB02g03740.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g102740.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g11830.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g11840.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g12470.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g12480.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g12600.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g17890.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g17900.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g18010.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g18020.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g21340.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g25510.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g37280.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g37290.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g37410.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g38640.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g38650.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g38660.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g43760.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g44510.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g45600.mRNA1 Phenylpropanoid POD low borderline
Bca_GomB02g46160.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g50320.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g50390.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g50420.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g51600.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g56710.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g58470.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g59780.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g59880.mRNA1 Phenylpropanoid POD low borderline
Bca_GomB02g59890.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g60170.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g62950.mRNA1 Phenylpropanoid POD medium pass
Bca_GomB02g64760.mRNA1 Phenylpropanoid POD medium pass