PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Bca_GomC07g31390.mRNA1 Alkaloid NMT medium pass
Bca_GomC07g31400.mRNA1 Alkaloid NMT low borderline
Bca_GomC07g40270.mRNA1 Alkaloid NMT medium pass
Bca_GomC07g40920.mRNA1 Alkaloid NMT medium pass
Bca_GomC07g43090.mRNA1 Alkaloid NMT medium pass
Bca_GomC07g57330.mRNA1 Alkaloid NMT low borderline
Bca_GomC07g58620.mRNA1 Alkaloid NMT medium pass
Bca_GomC07g59160.mRNA1 Alkaloid NMT medium pass
Bca_GomC07g60100.mRNA1 Alkaloid NMT medium pass
Bca_GomC07g66990.mRNA1 Alkaloid NMT medium pass
Bca_GomC07g70550.mRNA1 Alkaloid NMT medium borderline
Bca_GomC08g02390.mRNA1 Alkaloid NMT medium borderline
Bca_GomC08g02480.mRNA1 Alkaloid NMT medium borderline
Bca_GomC08g12980.mRNA1 Alkaloid NMT medium pass
Bca_GomC08g20170.mRNA1 Alkaloid NMT medium borderline
Bca_GomC08g29040.mRNA1 Alkaloid NMT medium borderline
Bca_GomC08g29100.mRNA1 Alkaloid NMT medium borderline
Bca_GomC08g29270.mRNA1 Alkaloid NMT medium borderline
Bca_GomC08g29320.mRNA1 Alkaloid NMT medium borderline
Bca_GomC08g30260.mRNA1 Alkaloid NMT medium borderline
Bca_GomC08g36010.mRNA1 Alkaloid NMT medium pass
Bca_GomC08g42780.mRNA1 Alkaloid NMT medium pass
Bca_GomC08g45030.mRNA1 Alkaloid NMT medium pass
Bca_GomC08g46960.mRNA1 Alkaloid NMT medium pass
Bca_GomC08g49080.mRNA1 Alkaloid NMT medium pass
Bca_GomC08g49090.mRNA1 Alkaloid NMT medium pass
Bca_GomC08g57710.mRNA1 Alkaloid NMT medium pass
Bca_GomC08g62960.mRNA1 Alkaloid NMT medium pass
Bca_GomC08g64390.mRNA1 Alkaloid NMT medium pass
Bca_GomC08g64420.mRNA1 Alkaloid NMT medium pass
Bca_GomC08g66430.mRNA1 Alkaloid NMT medium pass
Bca_GomC09g03860.mRNA1 Alkaloid NMT medium pass
Bca_GomC09g04160.mRNA1 Alkaloid NMT medium pass
Bca_GomC09g09100.mRNA1 Alkaloid NMT medium borderline
Bca_GomC09g15600.mRNA1 Alkaloid NMT low borderline
Bca_GomC09g20130.mRNA1 Alkaloid NMT low borderline
Bca_GomC09g22540.mRNA1 Alkaloid NMT low borderline
Bca_GomC09g26920.mRNA1 Alkaloid NMT medium borderline
Bca_GomC09g28910.mRNA1 Alkaloid NMT low borderline
Bca_GomC09g35330.mRNA1 Alkaloid NMT low borderline
Bca_GomC09g36000.mRNA1 Alkaloid NMT medium pass
Bca_GomC09g36500.mRNA1 Alkaloid NMT medium pass
Bca_GomC09g44240.mRNA1 Alkaloid NMT medium borderline
Bca_GomC09g53890.mRNA1 Alkaloid NMT low borderline
Bca_GomC09g56390.mRNA2 Alkaloid NMT medium pass
Bca_GomC09g60610.mRNA1 Alkaloid NMT medium pass
Bca_GomC09g60620.mRNA2 Alkaloid NMT medium pass
Bca_GomB07g16100.mRNA1 Alkaloid ODC low borderline
Bca_GomB02g19410.mRNA1 Alkaloid PMT low borderline
Bca_GomB02g39000.mRNA1 Alkaloid PMT medium pass