PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Bca_GomB07g25300.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomB07g25490.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB07g25630.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB07g28810.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomB07g32030.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB07g33080.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB07g47130.mRNA3 Alkaloid 7DLGT low borderline
Bca_GomB07g47140.mRNA2 Alkaloid 7DLGT low borderline
Bca_GomB07g53870.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomB07g60690.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB07g60710.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomB07g62830.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB07g76380.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB08g01390.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB08g18170.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomB08g18530.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomB08g22700.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB08g22710.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB08g22720.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB08g25080.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB08g25450.mRNA2 Alkaloid 7DLGT low borderline
Bca_GomB08g26480.mRNA2 Alkaloid 7DLGT medium pass
Bca_GomB08g29890.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB08g29900.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomB08g29910.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomB08g30570.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomB08g30580.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomB08g30590.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomB08g37740.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB08g37750.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB08g42600.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB08g42950.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB08g44430.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB08g44610.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomB08g53090.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomB08g53840.mRNA1 Alkaloid 7DLGT high pass
Bca_GomB08g66040.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB08g73180.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomB08g73190.mRNA1 Alkaloid 7DLGT high pass
Bca_GomB08g74080.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB08g84110.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomB08g86420.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomC01g04610.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomC01g08070.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomC01g08080.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomC01g08090.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomC01g12850.mRNA2 Alkaloid 7DLGT low borderline
Bca_GomC01g33810.mRNA1 Alkaloid 7DLGT high pass
Bca_GomC01g33820.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomC01g40930.mRNA1 Alkaloid 7DLGT low borderline