PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Bca_GomB04g20510.mRNA1 Alkaloid T16H medium borderline
Bca_GomB04g20530.mRNA1 Alkaloid T16H medium pass
Bca_GomB04g20800.mRNA1 Alkaloid T16H medium borderline
Bca_GomB04g28480.mRNA1 Alkaloid T16H medium borderline
Bca_GomB04g44540.mRNA1 Alkaloid T16H medium borderline
Bca_GomB04g44890.mRNA1 Alkaloid T16H medium borderline
Bca_GomB04g45270.mRNA1 Alkaloid T16H medium borderline
Bca_GomB04g60270.mRNA1 Alkaloid T16H medium borderline
Bca_GomB04g68620.mRNA1 Alkaloid T16H medium borderline
Bca_GomB05g11900.mRNA1 Alkaloid T16H medium pass
Bca_GomB05g55710.mRNA1 Alkaloid T16H medium borderline
Bca_GomB05g62670.mRNA2 Alkaloid T16H medium borderline
Bca_GomB05g64050.mRNA1 Alkaloid T16H high pass
Bca_GomB05g64240.mRNA1 Alkaloid T16H medium borderline
Bca_GomB06g38660.mRNA2 Alkaloid T16H medium borderline
Bca_GomB06g70000.mRNA1 Alkaloid T16H medium borderline
Bca_GomB06g74040.mRNA1 Alkaloid T16H medium borderline
Bca_GomB07g02390.mRNA1 Alkaloid T16H medium borderline
Bca_GomB07g24120.mRNA1 Alkaloid T16H medium borderline
Bca_GomB07g24130.mRNA1 Alkaloid T16H medium borderline
Bca_GomB07g27810.mRNA1 Alkaloid T16H medium borderline
Bca_GomB07g48460.mRNA1 Alkaloid T16H medium borderline
Bca_GomB07g56250.mRNA1 Alkaloid T16H medium borderline
Bca_GomB07g73660.mRNA1 Alkaloid T16H low borderline
Bca_GomB08g25500.mRNA1 Alkaloid T16H medium borderline
Bca_GomB08g25630.mRNA1 Alkaloid T16H medium borderline
Bca_GomB08g45630.mRNA1 Alkaloid T16H low borderline
Bca_GomB08g50850.mRNA1 Alkaloid T16H medium borderline
Bca_GomB08g65990.mRNA1 Alkaloid T16H medium borderline
Bca_GomC01g32800.mRNA1 Alkaloid T16H medium borderline
Bca_GomC01g49620.mRNA1 Alkaloid T16H medium borderline
Bca_GomC01g49740.mRNA1 Alkaloid T16H medium borderline
Bca_GomC01g49800.mRNA1 Alkaloid T16H medium borderline
Bca_GomC02g23850.mRNA1 Alkaloid T16H medium borderline
Bca_GomC02g23860.mRNA1 Alkaloid T16H medium borderline
Bca_GomC02g49440.mRNA1 Alkaloid T16H medium borderline
Bca_GomC02g49920.mRNA1 Alkaloid T16H medium borderline
Bca_GomC02g49930.mRNA1 Alkaloid T16H medium borderline
Bca_GomC02g56520.mRNA1 Alkaloid T16H medium borderline
Bca_GomC03g02880.mRNA1 Alkaloid T16H low borderline
Bca_GomC03g05910.mRNA1 Alkaloid T16H medium borderline
Bca_GomC03g06370.mRNA1 Alkaloid T16H medium borderline
Bca_GomC03g25840.mRNA1 Alkaloid T16H medium borderline
Bca_GomC03g25850.mRNA1 Alkaloid T16H medium borderline
Bca_GomC03g25960.mRNA1 Alkaloid T16H medium borderline
Bca_GomC03g39680.mRNA1 Alkaloid T16H medium borderline
Bca_GomC03g42550.mRNA1 Alkaloid T16H medium borderline
Bca_GomC03g54420.mRNA1 Alkaloid T16H medium borderline
Bca_GomC03g68670.mRNA1 Alkaloid T16H medium borderline
Bca_GomC03g78930.mRNA1 Alkaloid T16H medium borderline