PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Bca_GomC09g50720.mRNA1 Alkaloid T3O low borderline
Bca_GomC09g56250.mRNA1 Alkaloid T3O medium borderline
Bca_GomC09g57440.mRNA1 Alkaloid T3O medium borderline
Bca_GomC09g59890.mRNA2 Alkaloid T3O medium borderline
Bca_GomC09g59900.mRNA1 Alkaloid T3O medium borderline
Bca_GomC09g60110.mRNA1 Alkaloid T3O medium pass
Bca_GomC09g61200.mRNA1 Alkaloid T3O medium borderline
Bca_GomC09g61210.mRNA1 Alkaloid T3O medium borderline
Bca_GomC09g63050.mRNA1 Alkaloid T3O medium borderline
Bca_GomC09g63100.mRNA1 Alkaloid T3O medium borderline
Bca_GomB03g23980.mRNA1 Alkaloid TDC low borderline
Bca_GomB03g83340.mRNA1 Alkaloid TDC medium pass
Bca_GomB04g34090.mRNA1 Alkaloid TDC low borderline
Bca_GomB04g71880.mRNA1 Alkaloid TDC low borderline
Bca_GomB04g72090.mRNA1 Alkaloid TDC low borderline
Bca_GomB06g47540.mRNA1 Alkaloid TDC low borderline
Bca_GomB07g68430.mRNA1 Alkaloid TDC low borderline
Bca_GomC03g02310.mRNA1 Alkaloid TDC low borderline
Bca_GomC03g77630.mRNA1 Alkaloid TDC low borderline
Bca_GomC06g51040.mRNA1 Alkaloid TDC low borderline
Bca_GomC07g00790.mRNA1 Alkaloid TDC low borderline
Bca_GomC08g11200.mRNA1 Alkaloid TDC low borderline
Bca_GomB01g07680.mRNA1 Alkaloid TRI/TRII low borderline
Bca_GomB01g15690.mRNA1 Alkaloid TRI/TRII medium pass
Bca_GomB01g15700.mRNA1 Alkaloid TRI/TRII medium pass
Bca_GomB01g15720.mRNA1 Alkaloid TRI/TRII medium pass
Bca_GomB01g15730.mRNA1 Alkaloid TRI/TRII medium pass
Bca_GomB01g15740.mRNA1 Alkaloid TRI/TRII medium pass
Bca_GomB01g15760.mRNA1 Alkaloid TRI/TRII medium pass
Bca_GomB01g15780.mRNA1 Alkaloid TRI/TRII medium pass
Bca_GomB01g15790.mRNA1 Alkaloid TRI/TRII medium pass
Bca_GomB01g15830.mRNA1 Alkaloid TRI/TRII medium pass
Bca_GomB01g15840.mRNA1 Alkaloid TRI/TRII medium pass
Bca_GomB01g16720.mRNA1 Alkaloid TRI/TRII medium pass
Bca_GomB01g16730.mRNA1 Alkaloid TRI/TRII medium pass
Bca_GomB01g16750.mRNA1 Alkaloid TRI/TRII medium pass
Bca_GomB01g16760.mRNA1 Alkaloid TRI/TRII medium pass
Bca_GomB01g50250.mRNA1 Alkaloid TRI/TRII medium pass
Bca_GomB01g50600.mRNA1 Alkaloid TRI/TRII medium pass
Bca_GomB01g53920.mRNA1 Alkaloid TRI/TRII medium pass
Bca_GomB01g58550.mRNA1 Alkaloid TRI/TRII low borderline
Bca_GomB01g60110.mRNA1 Alkaloid TRI/TRII medium pass
Bca_GomB01g63270.mRNA1 Alkaloid TRI/TRII medium pass
Bca_GomB01g64220.mRNA1 Alkaloid TRI/TRII low borderline
Bca_GomB01g65600.mRNA1 Alkaloid TRI/TRII medium pass
Bca_GomB02g04700.mRNA1 Alkaloid TRI/TRII medium pass
Bca_GomB02g18900.mRNA2 Alkaloid TRI/TRII medium pass
Bca_GomB02g18950.mRNA1 Alkaloid TRI/TRII medium pass
Bca_GomB02g18960.mRNA1 Alkaloid TRI/TRII medium pass
Bca_GomB02g21150.mRNA1 Alkaloid TRI/TRII medium pass