PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Bca_GomC07g55610.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomC08g32670.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomC08g52230.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomC08g52570.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomC08g54350.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomC09g53690.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomC09g57940.mRNA1 Flavonoid ANS/LDOX medium borderline
Bca_GomB01g15040.mRNA1 Flavonoid C4H medium borderline
Bca_GomB01g67400.mRNA1 Flavonoid C4H low borderline
Bca_GomB02g77960.mRNA1 Flavonoid C4H low borderline
Bca_GomB02g82930.mRNA1 Flavonoid C4H medium borderline
Bca_GomB03g18750.mRNA1 Flavonoid C4H low borderline
Bca_GomB04g30390.mRNA1 Flavonoid C4H low borderline
Bca_GomB04g34050.mRNA1 Flavonoid C4H low borderline
Bca_GomB05g35590.mRNA1 Flavonoid C4H low borderline
Bca_GomB05g35600.mRNA1 Flavonoid C4H low borderline
Bca_GomB05g35650.mRNA1 Flavonoid C4H low borderline
Bca_GomB05g55440.mRNA3 Flavonoid C4H medium borderline
Bca_GomB05g55710.mRNA1 Flavonoid C4H medium borderline
Bca_GomB08g25500.mRNA1 Flavonoid C4H medium borderline
Bca_GomB08g25510.mRNA1 Flavonoid C4H medium borderline
Bca_GomC03g05910.mRNA1 Flavonoid C4H low borderline
Bca_GomC03g42480.mRNA1 Flavonoid C4H low borderline
Bca_GomC03g86630.mRNA1 Flavonoid C4H medium borderline
Bca_GomC04g20080.mRNA1 Flavonoid C4H medium borderline
Bca_GomC04g52390.mRNA1 Flavonoid C4H medium borderline
Bca_GomC04g52410.mRNA1 Flavonoid C4H medium borderline
Bca_GomC07g17240.mRNA1 Flavonoid C4H low borderline
Bca_GomC07g17260.mRNA1 Flavonoid C4H low borderline
Bca_GomC07g25860.mRNA1 Flavonoid C4H low borderline
Bca_GomC07g41850.mRNA1 Flavonoid C4H medium borderline
Bca_GomB02g51660.mRNA1 Flavonoid CHI medium pass
Bca_GomB05g58930.mRNA1 Flavonoid CHI medium pass
Bca_GomB05g58940.mRNA1 Flavonoid CHI medium pass
Bca_GomB06g69720.mRNA1 Flavonoid CHI medium pass
Bca_GomC06g27250.mRNA1 Flavonoid CHI medium pass
Bca_GomC06g30360.mRNA1 Flavonoid CHI medium pass
Bca_GomC07g64770.mRNA1 Flavonoid CHI medium pass
Bca_GomC08g36690.mRNA1 Flavonoid CHI medium pass
Bca_GomC08g37170.mRNA1 Flavonoid CHI medium pass
Bca_GomC08g37180.mRNA1 Flavonoid CHI medium pass
Bca_GomC09g60370.mRNA1 Flavonoid CHI medium pass
Bca_GomB01g07140.mRNA1 Flavonoid CHS medium pass
Bca_GomB02g102690.mRNA1 Flavonoid CHS medium pass
Bca_GomB02g106920.mRNA1 Flavonoid CHS medium pass
Bca_GomB02g27830.mRNA1 Flavonoid CHS medium pass
Bca_GomB02g44680.mRNA1 Flavonoid CHS medium pass
Bca_GomB02g95890.mRNA1 Flavonoid CHS medium pass
Bca_GomB02g96740.mRNA1 Flavonoid CHS medium pass
Bca_GomB03g23830.mRNA1 Flavonoid CHS medium pass