PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Bca_GomB03g67390.mRNA1 Flavonoid IFR medium pass
Bca_GomB03g82740.mRNA1 Flavonoid IFR low borderline
Bca_GomB03g86970.mRNA1 Flavonoid IFR high pass
Bca_GomB04g06760.mRNA1 Flavonoid IFR low borderline
Bca_GomB04g06800.mRNA1 Flavonoid IFR low borderline
Bca_GomB04g41040.mRNA1 Flavonoid IFR low borderline
Bca_GomB04g41080.mRNA1 Flavonoid IFR low borderline
Bca_GomB04g44360.mRNA1 Flavonoid IFR low borderline
Bca_GomB04g47410.mRNA1 Flavonoid IFR low borderline
Bca_GomB04g47650.mRNA1 Flavonoid IFR low borderline
Bca_GomB04g57790.mRNA1 Flavonoid IFR high pass
Bca_GomB04g58130.mRNA1 Flavonoid IFR low borderline
Bca_GomB05g18610.mRNA1 Flavonoid IFR low borderline
Bca_GomB05g19290.mRNA1 Flavonoid IFR low borderline
Bca_GomB05g26860.mRNA1 Flavonoid IFR low borderline
Bca_GomB05g27350.mRNA1 Flavonoid IFR low borderline
Bca_GomB05g32770.mRNA1 Flavonoid IFR low borderline
Bca_GomB05g37920.mRNA1 Flavonoid IFR low borderline
Bca_GomB05g41690.mRNA1 Flavonoid IFR low borderline
Bca_GomB05g84290.mRNA1 Flavonoid IFR high pass
Bca_GomB06g02550.mRNA1 Flavonoid IFR low borderline
Bca_GomB06g20590.mRNA1 Flavonoid IFR low borderline
Bca_GomB06g21590.mRNA1 Flavonoid IFR low borderline
Bca_GomB06g55260.mRNA1 Flavonoid IFR low borderline
Bca_GomB06g56380.mRNA1 Flavonoid IFR low borderline
Bca_GomB06g74890.mRNA1 Flavonoid IFR low borderline
Bca_GomB06g78330.mRNA1 Flavonoid IFR high pass
Bca_GomB06g79860.mRNA1 Flavonoid IFR low borderline
Bca_GomB06g81220.mRNA1 Flavonoid IFR low borderline
Bca_GomB08g01940.mRNA1 Flavonoid IFR low borderline
Bca_GomB08g40560.mRNA1 Flavonoid IFR low borderline
Bca_GomB08g40630.mRNA1 Flavonoid IFR low borderline
Bca_GomB08g41250.mRNA1 Flavonoid IFR low borderline
Bca_GomB08g54840.mRNA1 Flavonoid IFR low borderline
Bca_GomB08g84470.mRNA1 Flavonoid IFR low borderline
Bca_GomC01g07650.mRNA1 Flavonoid IFR high pass
Bca_GomC01g12280.mRNA1 Flavonoid IFR low borderline
Bca_GomC01g17050.mRNA1 Flavonoid IFR low borderline
Bca_GomC01g22960.mRNA1 Flavonoid IFR low borderline
Bca_GomC01g56200.mRNA1 Flavonoid IFR medium pass
Bca_GomC02g06160.mRNA1 Flavonoid IFR low borderline
Bca_GomC02g09810.mRNA1 Flavonoid IFR low borderline
Bca_GomC02g30840.mRNA1 Flavonoid IFR high pass
Bca_GomC02g61230.mRNA1 Flavonoid IFR low borderline
Bca_GomC03g04940.mRNA1 Flavonoid IFR low borderline
Bca_GomC03g36010.mRNA1 Flavonoid IFR low borderline
Bca_GomC03g40530.mRNA1 Flavonoid IFR low borderline
Bca_GomC03g62090.mRNA1 Flavonoid IFR low borderline
Bca_GomC03g80710.mRNA1 Flavonoid IFR high pass
Bca_GomC04g11040.mRNA1 Flavonoid IFR low borderline