PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Bca_GomC04g29640.mRNA1 Flavonoid IFR low borderline
Bca_GomC04g43650.mRNA1 Flavonoid IFR low borderline
Bca_GomC04g55650.mRNA1 Flavonoid IFR low borderline
Bca_GomC04g58670.mRNA1 Flavonoid IFR low borderline
Bca_GomC05g10610.mRNA1 Flavonoid IFR low borderline
Bca_GomC05g13480.mRNA1 Flavonoid IFR low borderline
Bca_GomC05g13950.mRNA1 Flavonoid IFR low borderline
Bca_GomC05g19220.mRNA1 Flavonoid IFR low borderline
Bca_GomC05g20310.mRNA1 Flavonoid IFR low borderline
Bca_GomC05g22090.mRNA1 Flavonoid IFR high pass
Bca_GomC05g22360.mRNA1 Flavonoid IFR high pass
Bca_GomC05g29930.mRNA1 Flavonoid IFR low borderline
Bca_GomC05g35440.mRNA1 Flavonoid IFR high pass
Bca_GomC05g35680.mRNA1 Flavonoid IFR low borderline
Bca_GomC05g40510.mRNA1 Flavonoid IFR high pass
Bca_GomC06g32850.mRNA1 Flavonoid IFR low borderline
Bca_GomC06g53290.mRNA1 Flavonoid IFR high pass
Bca_GomC06g53310.mRNA1 Flavonoid IFR high pass
Bca_GomC06g53320.mRNA1 Flavonoid IFR high pass
Bca_GomC07g54240.mRNA1 Flavonoid IFR low borderline
Bca_GomC07g60320.mRNA1 Flavonoid IFR low borderline
Bca_GomC08g24520.mRNA1 Flavonoid IFR low borderline
Bca_GomC08g35400.mRNA1 Flavonoid IFR low borderline
Bca_GomC08g46460.mRNA1 Flavonoid IFR low borderline
Bca_GomC08g49840.mRNA1 Flavonoid IFR low borderline
Bca_GomC08g51980.mRNA1 Flavonoid IFR low borderline
Bca_GomC09g45550.mRNA1 Flavonoid IFR medium pass
Bca_GomC09g55270.mRNA1 Flavonoid IFR low borderline
Bca_GomB01g00780.mRNA1 Flavonoid IFS medium borderline
Bca_GomB01g02250.mRNA1 Flavonoid IFS medium borderline
Bca_GomB01g03970.mRNA1 Flavonoid IFS medium borderline
Bca_GomB01g03990.mRNA1 Flavonoid IFS medium borderline
Bca_GomB01g04000.mRNA1 Flavonoid IFS medium borderline
Bca_GomB01g07370.mRNA1 Flavonoid IFS medium borderline
Bca_GomB01g07380.mRNA1 Flavonoid IFS medium borderline
Bca_GomB01g07500.mRNA1 Flavonoid IFS medium borderline
Bca_GomB01g10940.mRNA1 Flavonoid IFS low borderline
Bca_GomB01g10950.mRNA1 Flavonoid IFS low borderline
Bca_GomB01g15920.mRNA1 Flavonoid IFS low borderline
Bca_GomB01g22510.mRNA1 Flavonoid IFS low borderline
Bca_GomB01g23080.mRNA1 Flavonoid IFS medium borderline
Bca_GomB01g25150.mRNA1 Flavonoid IFS low borderline
Bca_GomB01g25190.mRNA1 Flavonoid IFS low borderline
Bca_GomB01g29780.mRNA1 Flavonoid IFS low borderline
Bca_GomB01g30690.mRNA1 Flavonoid IFS medium borderline
Bca_GomB01g41800.mRNA1 Flavonoid IFS medium borderline
Bca_GomB01g41810.mRNA1 Flavonoid IFS medium borderline
Bca_GomB01g41830.mRNA1 Flavonoid IFS medium borderline
Bca_GomB01g43080.mRNA1 Flavonoid IFS low borderline
Bca_GomB01g48040.mRNA1 Flavonoid IFS low borderline