PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BR6OX2/CYP85A2
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Protein/Isoform Record Pathway Family Confidence Status
Bca_GomC07g35280.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC07g42790.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC07g44090.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC07g63160.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC08g14260.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC08g24670.mRNA2 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC08g24760.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC08g26720.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC08g35200.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC08g43630.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC08g45580.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC08g49280.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC08g49540.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC08g54320.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC08g54630.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC08g54640.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC08g57920.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC08g58300.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC08g58340.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC08g59460.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC08g61490.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC08g65040.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC09g02530.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC09g19590.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC09g24940.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC09g26990.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC09g56250.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC09g59890.mRNA2 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC09g59900.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC09g61200.mRNA1 Steroid BR6OX2/CYP85A2 low borderline
Bca_GomC09g61210.mRNA1 Steroid BR6OX2/CYP85A2 low borderline