PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Protein/Isoform Record Pathway Family Confidence Status
Bca_GomB07g17880.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB07g19270.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB07g19400.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB07g19410.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB07g26720.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB07g30360.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB07g38530.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB07g39330.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB07g39340.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB07g41350.mRNA1 Steroid DWF4/CYP90B1 medium borderline
Bca_GomB07g41750.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB07g41850.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB07g48390.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB07g48460.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB07g52120.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB07g52130.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB07g52140.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB07g52150.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB07g52360.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB07g52370.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB07g52380.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB07g52410.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB07g62610.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB08g01130.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB08g04200.mRNA1 Steroid DWF4/CYP90B1 medium borderline
Bca_GomB08g20210.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB08g20220.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB08g23450.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB08g36950.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB08g39340.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB08g71650.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomB08g80310.mRNA1 Steroid DWF4/CYP90B1 medium borderline
Bca_GomB08g84270.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC01g02310.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC01g02320.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC01g02690.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC01g02910.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC01g03630.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC01g03650.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC01g03690.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC01g04030.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC01g04040.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC01g04070.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC01g04080.mRNA1 Steroid DWF4/CYP90B1 medium borderline
Bca_GomC01g04100.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC01g04110.mRNA2 Steroid DWF4/CYP90B1 low borderline
Bca_GomC01g04130.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC01g11330.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC01g11360.mRNA1 Steroid DWF4/CYP90B1 low borderline
Bca_GomC01g24120.mRNA1 Steroid DWF4/CYP90B1 low borderline