PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: H6H
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Protein/Isoform Record Pathway Family Confidence Status
Bca_GomB08g86620.mRNA1 Alkaloid H6H medium borderline
Bca_GomB08g87100.mRNA1 Alkaloid H6H low borderline
Bca_GomB08g94440.mRNA1 Alkaloid H6H medium borderline
Bca_GomC01g42620.mRNA1 Alkaloid H6H medium borderline
Bca_GomC01g47550.mRNA1 Alkaloid H6H low borderline
Bca_GomC01g47600.mRNA1 Alkaloid H6H low borderline
Bca_GomC01g51830.mRNA1 Alkaloid H6H low borderline
Bca_GomC02g04720.mRNA1 Alkaloid H6H high pass
Bca_GomC02g22560.mRNA1 Alkaloid H6H low borderline
Bca_GomC02g29730.mRNA1 Alkaloid H6H low borderline
Bca_GomC02g33960.mRNA1 Alkaloid H6H medium borderline
Bca_GomC02g34880.mRNA1 Alkaloid H6H low borderline
Bca_GomC02g35770.mRNA1 Alkaloid H6H low borderline
Bca_GomC02g37940.mRNA1 Alkaloid H6H low borderline
Bca_GomC02g37950.mRNA1 Alkaloid H6H low borderline
Bca_GomC02g56780.mRNA1 Alkaloid H6H medium borderline
Bca_GomC02g56830.mRNA1 Alkaloid H6H low borderline
Bca_GomC02g56840.mRNA1 Alkaloid H6H medium borderline
Bca_GomC02g57410.mRNA1 Alkaloid H6H medium borderline
Bca_GomC02g59580.mRNA1 Alkaloid H6H medium pass
Bca_GomC02g59590.mRNA1 Alkaloid H6H medium borderline
Bca_GomC03g42590.mRNA1 Alkaloid H6H low borderline
Bca_GomC03g42600.mRNA1 Alkaloid H6H low borderline
Bca_GomC03g42610.mRNA1 Alkaloid H6H low borderline
Bca_GomC03g85560.mRNA1 Alkaloid H6H medium pass
Bca_GomC04g00840.mRNA1 Alkaloid H6H low borderline
Bca_GomC04g09800.mRNA1 Alkaloid H6H low borderline
Bca_GomC04g16910.mRNA1 Alkaloid H6H low borderline
Bca_GomC04g26650.mRNA1 Alkaloid H6H medium pass
Bca_GomC04g28050.mRNA1 Alkaloid H6H medium borderline
Bca_GomC04g29180.mRNA1 Alkaloid H6H low borderline
Bca_GomC04g34400.mRNA1 Alkaloid H6H medium borderline
Bca_GomC04g35670.mRNA1 Alkaloid H6H low borderline
Bca_GomC04g36280.mRNA1 Alkaloid H6H low borderline
Bca_GomC04g47550.mRNA1 Alkaloid H6H high pass
Bca_GomC04g52760.mRNA1 Alkaloid H6H medium pass
Bca_GomC05g05170.mRNA1 Alkaloid H6H medium pass
Bca_GomC05g05180.mRNA1 Alkaloid H6H medium pass
Bca_GomC05g06870.mRNA1 Alkaloid H6H low borderline
Bca_GomC05g07520.mRNA1 Alkaloid H6H medium borderline
Bca_GomC05g07990.mRNA1 Alkaloid H6H medium borderline
Bca_GomC05g14770.mRNA1 Alkaloid H6H medium borderline
Bca_GomC05g15630.mRNA1 Alkaloid H6H low borderline
Bca_GomC05g15650.mRNA1 Alkaloid H6H low borderline
Bca_GomC05g18090.mRNA1 Alkaloid H6H low borderline
Bca_GomC05g42970.mRNA1 Alkaloid H6H medium borderline
Bca_GomC05g49660.mRNA1 Alkaloid H6H low borderline
Bca_GomC05g49690.mRNA1 Alkaloid H6H low borderline
Bca_GomC05g53750.mRNA1 Alkaloid H6H low borderline
Bca_GomC05g55660.mRNA1 Alkaloid H6H medium borderline