PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PYKS
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Protein/Isoform Record Pathway Family Confidence Status
Bca_GomB01g07140.mRNA1 Alkaloid PYKS high pass
Bca_GomB01g16300.mRNA1 Alkaloid PYKS low borderline
Bca_GomB01g16870.mRNA1 Alkaloid PYKS low borderline
Bca_GomB01g18550.mRNA1 Alkaloid PYKS low borderline
Bca_GomB01g18600.mRNA1 Alkaloid PYKS low borderline
Bca_GomB01g33590.mRNA1 Alkaloid PYKS low borderline
Bca_GomB01g64890.mRNA1 Alkaloid PYKS low borderline
Bca_GomB01g65280.mRNA1 Alkaloid PYKS low borderline
Bca_GomB02g00160.mRNA1 Alkaloid PYKS low borderline
Bca_GomB02g00500.mRNA2 Alkaloid PYKS low borderline
Bca_GomB02g03900.mRNA1 Alkaloid PYKS low borderline
Bca_GomB02g04050.mRNA2 Alkaloid PYKS low borderline
Bca_GomB02g102390.mRNA1 Alkaloid PYKS low borderline
Bca_GomB02g102690.mRNA1 Alkaloid PYKS high pass
Bca_GomB02g106830.mRNA2 Alkaloid PYKS low borderline
Bca_GomB02g106920.mRNA1 Alkaloid PYKS high pass
Bca_GomB02g107050.mRNA1 Alkaloid PYKS low borderline
Bca_GomB02g12400.mRNA1 Alkaloid PYKS low borderline
Bca_GomB02g27830.mRNA1 Alkaloid PYKS high pass
Bca_GomB02g44680.mRNA1 Alkaloid PYKS high pass
Bca_GomB02g51930.mRNA1 Alkaloid PYKS low borderline
Bca_GomB02g52310.mRNA1 Alkaloid PYKS low borderline
Bca_GomB02g52550.mRNA2 Alkaloid PYKS low borderline
Bca_GomB02g52610.mRNA1 Alkaloid PYKS low borderline
Bca_GomB02g59770.mRNA1 Alkaloid PYKS low borderline
Bca_GomB02g59820.mRNA1 Alkaloid PYKS low borderline
Bca_GomB02g78240.mRNA1 Alkaloid PYKS low borderline
Bca_GomB02g83820.mRNA1 Alkaloid PYKS low borderline
Bca_GomB02g95590.mRNA3 Alkaloid PYKS low borderline
Bca_GomB02g95890.mRNA1 Alkaloid PYKS high pass
Bca_GomB02g96740.mRNA1 Alkaloid PYKS high pass
Bca_GomB03g03460.mRNA1 Alkaloid PYKS low borderline
Bca_GomB03g05290.mRNA1 Alkaloid PYKS low borderline
Bca_GomB03g23830.mRNA1 Alkaloid PYKS medium pass
Bca_GomB03g28490.mRNA1 Alkaloid PYKS low borderline
Bca_GomB03g28500.mRNA2 Alkaloid PYKS low borderline
Bca_GomB03g28700.mRNA1 Alkaloid PYKS high pass
Bca_GomB03g38290.mRNA1 Alkaloid PYKS low borderline
Bca_GomB03g38680.mRNA1 Alkaloid PYKS low borderline
Bca_GomB03g50100.mRNA1 Alkaloid PYKS low borderline
Bca_GomB03g52490.mRNA1 Alkaloid PYKS low borderline
Bca_GomB03g54330.mRNA1 Alkaloid PYKS low borderline
Bca_GomB03g58470.mRNA1 Alkaloid PYKS low borderline
Bca_GomB03g61650.mRNA1 Alkaloid PYKS low borderline
Bca_GomB03g75790.mRNA1 Alkaloid PYKS low borderline
Bca_GomB03g87090.mRNA1 Alkaloid PYKS low borderline
Bca_GomB03g98010.mRNA1 Alkaloid PYKS low borderline
Bca_GomB04g16770.mRNA1 Alkaloid PYKS low borderline
Bca_GomB04g16930.mRNA1 Alkaloid PYKS high pass
Bca_GomB04g17260.mRNA1 Alkaloid PYKS high pass