PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Bca_GomC09g35950.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC09g50380.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC09g50530.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC09g50720.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC09g56250.mRNA1 Rosmarinic Acid C4H medium pass
Bca_GomC09g57440.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC09g59890.mRNA2 Rosmarinic Acid C4H low borderline
Bca_GomC09g59900.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC09g60110.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC09g60380.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC09g60940.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC09g61200.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC09g61210.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC09g63050.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomC09g63100.mRNA1 Rosmarinic Acid C4H low borderline
Bca_GomB01g27260.mRNA1 Rosmarinic Acid CPR medium pass
Bca_GomB01g28120.mRNA1 Rosmarinic Acid CPR medium pass
Bca_GomB01g42060.mRNA1 Rosmarinic Acid CPR low borderline
Bca_GomB01g42340.mRNA1 Rosmarinic Acid CPR medium pass
Bca_GomB02g78440.mRNA1 Rosmarinic Acid CPR medium pass
Bca_GomB02g87970.mRNA1 Rosmarinic Acid CPR medium pass
Bca_GomB02g91860.mRNA1 Rosmarinic Acid CPR medium pass
Bca_GomB02g91870.mRNA1 Rosmarinic Acid CPR medium pass
Bca_GomB02g92900.mRNA1 Rosmarinic Acid CPR medium pass
Bca_GomB05g18810.mRNA1 Rosmarinic Acid CPR medium pass
Bca_GomB05g19530.mRNA1 Rosmarinic Acid CPR medium pass
Bca_GomB05g26220.mRNA1 Rosmarinic Acid CPR medium pass
Bca_GomB05g26230.mRNA1 Rosmarinic Acid CPR medium pass
Bca_GomB05g26620.mRNA1 Rosmarinic Acid CPR medium pass
Bca_GomB05g26640.mRNA1 Rosmarinic Acid CPR medium pass
Bca_GomB05g36410.mRNA1 Rosmarinic Acid CPR medium pass
Bca_GomB06g10840.mRNA1 Rosmarinic Acid CPR low borderline
Bca_GomB07g00260.mRNA1 Rosmarinic Acid CPR medium pass
Bca_GomB07g00510.mRNA1 Rosmarinic Acid CPR medium pass
Bca_GomB07g02890.mRNA1 Rosmarinic Acid CPR medium pass
Bca_GomB07g30920.mRNA1 Rosmarinic Acid CPR medium pass
Bca_GomB07g31680.mRNA1 Rosmarinic Acid CPR low borderline
Bca_GomB07g43720.mRNA1 Rosmarinic Acid CPR low borderline
Bca_GomB07g43810.mRNA1 Rosmarinic Acid CPR medium pass
Bca_GomB08g03230.mRNA1 Rosmarinic Acid CPR medium pass
Bca_GomB08g56550.mRNA1 Rosmarinic Acid CPR medium pass
Bca_GomB08g82440.mRNA1 Rosmarinic Acid CPR medium pass
Bca_GomC01g12520.mRNA1 Rosmarinic Acid CPR medium pass
Bca_GomC01g14040.mRNA1 Rosmarinic Acid CPR low borderline
Bca_GomC01g23710.mRNA1 Rosmarinic Acid CPR medium pass
Bca_GomC01g23720.mRNA1 Rosmarinic Acid CPR medium pass
Bca_GomC01g32470.mRNA1 Rosmarinic Acid CPR low borderline
Bca_GomC01g41380.mRNA1 Rosmarinic Acid CPR low borderline
Bca_GomC02g59380.mRNA1 Rosmarinic Acid CPR low borderline
Bca_GomC03g34100.mRNA1 Rosmarinic Acid CPR low borderline