PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Bca_GomC03g45880.mRNA1 Rosmarinic Acid CPR low borderline CPR__00007__sp_Q96327_EBP1_ARATH
Bca_GomC03g89590.mRNA1 Rosmarinic Acid CPR medium pass CPR__00009__sp_Q9SUM3_NCPR2_ARATH
Bca_GomC03g89850.mRNA1 Rosmarinic Acid CPR medium pass CPR__00009__sp_Q9SUM3_NCPR2_ARATH
Bca_GomC04g29670.mRNA3 Rosmarinic Acid CPR low borderline CPR__00001__sp_A0A2U1LIM9_NCPR1_ARTAN
Bca_GomC04g33410.mRNA1 Rosmarinic Acid CPR medium pass CPR__00009__sp_Q9SUM3_NCPR2_ARATH
Bca_GomC05g43820.mRNA1 Rosmarinic Acid CPR medium pass CPR__00004__sp_Q0J705_NCPR2_ORYSJ
Bca_GomC05g43910.mRNA1 Rosmarinic Acid CPR low borderline CPR__00001__sp_A0A2U1LIM9_NCPR1_ARTAN
Bca_GomC07g16160.mRNA1 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
Bca_GomC07g29810.mRNA1 Rosmarinic Acid CPR medium pass CPR__00008__sp_Q9SB48_NCPR1_ARATH
Bca_GomC07g46780.mRNA1 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
Bca_GomC07g54640.mRNA1 Rosmarinic Acid CPR medium pass CPR__00008__sp_Q9SB48_NCPR1_ARATH
Bca_GomC08g33780.mRNA1 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
Bca_GomC09g13610.mRNA1 Rosmarinic Acid CPR low borderline CPR__00003__sp_C5YJG8_NCPR_SORBI
Bca_GomB02g07600.mRNA1 Rosmarinic Acid HPPR low borderline HPPR__00001__sp_Q65CJ7_HPPR_PLESU
Bca_GomB02g07620.mRNA1 Rosmarinic Acid HPPR medium pass HPPR__00001__sp_Q65CJ7_HPPR_PLESU
Bca_GomB02g07630.mRNA1 Rosmarinic Acid HPPR medium pass HPPR__00001__sp_Q65CJ7_HPPR_PLESU
Bca_GomB02g07650.mRNA1 Rosmarinic Acid HPPR medium pass HPPR__00001__sp_Q65CJ7_HPPR_PLESU
Bca_GomB04g44180.mRNA1 Rosmarinic Acid HPPR medium pass HPPR__00001__sp_Q65CJ7_HPPR_PLESU
Bca_GomB06g65670.mRNA1 Rosmarinic Acid HPPR medium pass HPPR__00001__sp_Q65CJ7_HPPR_PLESU
Bca_GomB06g81550.mRNA1 Rosmarinic Acid HPPR medium pass HPPR__00001__sp_Q65CJ7_HPPR_PLESU
Bca_GomB06g86140.mRNA1 Rosmarinic Acid HPPR medium pass HPPR__00001__sp_Q65CJ7_HPPR_PLESU
Bca_GomC01g30680.mRNA1 Rosmarinic Acid HPPR medium pass HPPR__00001__sp_Q65CJ7_HPPR_PLESU
Bca_GomC01g57020.mRNA1 Rosmarinic Acid HPPR medium pass HPPR__00001__sp_Q65CJ7_HPPR_PLESU
Bca_GomC05g14090.mRNA1 Rosmarinic Acid HPPR medium pass HPPR__00001__sp_Q65CJ7_HPPR_PLESU
Bca_GomC06g12940.mRNA1 Rosmarinic Acid HPPR medium pass HPPR__00001__sp_Q65CJ7_HPPR_PLESU
Bca_GomC06g33400.mRNA1 Rosmarinic Acid HPPR medium pass HPPR__00001__sp_Q65CJ7_HPPR_PLESU
Bca_GomC08g58720.mRNA1 Rosmarinic Acid HPPR medium pass HPPR__00001__sp_Q65CJ7_HPPR_PLESU
Bca_GomC08g58730.mRNA1 Rosmarinic Acid HPPR medium pass HPPR__00001__sp_Q65CJ7_HPPR_PLESU
Bca_GomC08g58740.mRNA1 Rosmarinic Acid HPPR medium pass HPPR__00001__sp_Q65CJ7_HPPR_PLESU
Bca_GomB01g08030.mRNA1 Rosmarinic Acid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
Bca_GomB01g08060.mRNA1 Rosmarinic Acid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
Bca_GomB01g54160.mRNA1 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bca_GomB01g54330.mRNA1 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bca_GomB01g54340.mRNA1 Rosmarinic Acid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bca_GomB05g17800.mRNA1 Rosmarinic Acid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
Bca_GomB05g45730.mRNA1 Rosmarinic Acid PAL high pass PAL__00004__sp_P45725_PAL3_ARATH
Bca_GomB06g21110.mRNA1 Rosmarinic Acid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
Bca_GomB06g70740.mRNA1 Rosmarinic Acid PAL high pass PAL__00003__sp_P45724_PAL2_ARATH
Bca_GomB06g71780.mRNA1 Rosmarinic Acid PAL high pass PAL__00003__sp_P45724_PAL2_ARATH
Bca_GomB06g81160.mRNA1 Rosmarinic Acid PAL high pass PAL__00003__sp_P45724_PAL2_ARATH
Bca_GomB06g81170.mRNA1 Rosmarinic Acid PAL high pass PAL__00003__sp_P45724_PAL2_ARATH
Bca_GomB08g30180.mRNA1 Rosmarinic Acid PAL medium pass PAL__00002__sp_P35510_PAL1_ARATH
Bca_GomB08g30190.mRNA1 Rosmarinic Acid PAL medium pass PAL__00002__sp_P35510_PAL1_ARATH
Bca_GomB08g30200.mRNA1 Rosmarinic Acid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
Bca_GomB08g30780.mRNA1 Rosmarinic Acid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
Bca_GomB08g84200.mRNA1 Rosmarinic Acid PAL high pass PAL__00003__sp_P45724_PAL2_ARATH
Bca_GomC04g11750.mRNA1 Rosmarinic Acid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
Bca_GomC04g37240.mRNA1 Rosmarinic Acid PAL low borderline PAL__00003__sp_P45724_PAL2_ARATH
Bca_GomC04g37260.mRNA1 Rosmarinic Acid PAL high pass PAL__00003__sp_P45724_PAL2_ARATH
Bca_GomC04g37440.mRNA1 Rosmarinic Acid PAL high pass PAL__00003__sp_P45724_PAL2_ARATH