PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Bca_GomC08g23210.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomC08g30060.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomC08g31370.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomC08g31400.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomC08g32400.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomC08g36990.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomC08g46470.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomC09g48440.mRNA1 Phenylpropanoid CSE low borderline
Bca_GomC09g54290.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomC09g63420.mRNA1 Phenylpropanoid CSE medium pass
Bca_GomB01g41800.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB01g41830.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB02g10080.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB02g18610.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB02g20570.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB02g29930.mRNA1 Phenylpropanoid F5H/CYP84A low borderline
Bca_GomB02g74100.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB02g77120.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB02g96880.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB02g96890.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB02g99550.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB02g99560.mRNA1 Phenylpropanoid F5H/CYP84A medium pass
Bca_GomB03g31200.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB03g49990.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB03g65260.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB03g88790.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB04g20530.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB04g20800.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB04g28480.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB04g44890.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB04g45270.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB04g60270.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB04g68620.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB04g74570.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB05g02330.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB05g35270.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB05g64060.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB05g64240.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB05g64320.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB06g54060.mRNA1 Phenylpropanoid F5H/CYP84A medium pass
Bca_GomB06g54920.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB06g86670.mRNA2 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB07g24120.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB07g39340.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB07g48490.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB07g56260.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB07g56270.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB07g73660.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB07g79990.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline
Bca_GomB08g50850.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline