PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Bca_GomC01g32760.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Bca_GomC01g32800.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Bca_GomC01g43740.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Bca_GomC02g56750.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Bca_GomC03g39680.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Bca_GomC03g42550.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Bca_GomC03g54390.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Bca_GomC03g54420.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Bca_GomC03g58360.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Bca_GomC03g59830.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Bca_GomC03g90110.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Bca_GomC04g44950.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Bca_GomC04g56480.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Bca_GomC05g12770.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Bca_GomC05g18860.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Bca_GomC05g45260.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Bca_GomC05g51170.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Bca_GomC05g59560.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Bca_GomC06g10200.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Bca_GomC07g20510.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Bca_GomC07g35790.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Bca_GomC07g41130.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Bca_GomC07g51610.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Bca_GomC07g60300.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Bca_GomC07g63160.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Bca_GomC08g12620.mRNA1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Bca_GomC09g59890.mRNA2 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
Bca_GomB01g02910.mRNA1 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
Bca_GomB01g03230.mRNA1 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
Bca_GomB01g03380.mRNA1 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
Bca_GomB01g26750.mRNA1 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
Bca_GomB01g73320.mRNA1 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
Bca_GomB02g14860.mRNA1 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
Bca_GomB02g28010.mRNA1 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
Bca_GomB02g49690.mRNA2 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
Bca_GomB02g49960.mRNA1 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
Bca_GomB02g55120.mRNA1 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
Bca_GomB02g57180.mRNA1 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
Bca_GomB03g24200.mRNA1 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
Bca_GomB03g82920.mRNA1 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
Bca_GomB04g07690.mRNA1 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
Bca_GomB04g16290.mRNA1 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
Bca_GomB04g18000.mRNA1 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
Bca_GomB04g41830.mRNA1 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
Bca_GomB04g52050.mRNA1 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
Bca_GomB05g02530.mRNA1 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
Bca_GomB05g06930.mRNA1 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
Bca_GomB05g26240.mRNA1 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
Bca_GomB05g26630.mRNA1 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
Bca_GomB05g43520.mRNA1 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH