PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Bca_GomC07g03820.mRNA1 Flavonoid 4CL medium pass
Bca_GomC07g07890.mRNA1 Flavonoid 4CL medium pass
Bca_GomC07g71210.mRNA1 Flavonoid 4CL medium pass
Bca_GomC08g25090.mRNA1 Flavonoid 4CL medium pass
Bca_GomC08g29720.mRNA1 Flavonoid 4CL medium pass
Bca_GomC08g29800.mRNA1 Flavonoid 4CL medium pass
Bca_GomC08g29810.mRNA1 Flavonoid 4CL medium pass
Bca_GomC08g29820.mRNA1 Flavonoid 4CL medium pass
Bca_GomC08g32090.mRNA1 Flavonoid 4CL medium pass
Bca_GomC09g16120.mRNA1 Flavonoid 4CL medium pass
Bca_GomC09g25140.mRNA1 Flavonoid 4CL medium pass
Bca_GomC09g25150.mRNA1 Flavonoid 4CL medium pass
Bca_GomC09g28310.mRNA1 Flavonoid 4CL low borderline
Bca_GomC09g53350.mRNA1 Flavonoid 4CL medium pass
Bca_GomC09g53400.mRNA1 Flavonoid 4CL medium pass
Bca_GomC09g53420.mRNA1 Flavonoid 4CL medium pass
Bca_GomB01g11640.mRNA1 Flavonoid ANR medium borderline
Bca_GomB01g32440.mRNA1 Flavonoid ANR low borderline
Bca_GomB01g74810.mRNA1 Flavonoid ANR medium borderline
Bca_GomB01g75390.mRNA1 Flavonoid ANR medium borderline
Bca_GomB02g102500.mRNA1 Flavonoid ANR medium borderline
Bca_GomB02g39100.mRNA1 Flavonoid ANR medium borderline
Bca_GomB02g44150.mRNA1 Flavonoid ANR low borderline
Bca_GomB02g56250.mRNA1 Flavonoid ANR medium borderline
Bca_GomB02g73300.mRNA1 Flavonoid ANR low borderline
Bca_GomB02g73460.mRNA1 Flavonoid ANR low borderline
Bca_GomB02g89630.mRNA1 Flavonoid ANR medium borderline
Bca_GomB02g94630.mRNA2 Flavonoid ANR medium pass
Bca_GomB02g95230.mRNA1 Flavonoid ANR medium pass
Bca_GomB03g53360.mRNA1 Flavonoid ANR medium borderline
Bca_GomB03g58480.mRNA1 Flavonoid ANR medium borderline
Bca_GomB03g69180.mRNA1 Flavonoid ANR low borderline
Bca_GomB03g69200.mRNA1 Flavonoid ANR medium pass
Bca_GomB03g90130.mRNA1 Flavonoid ANR medium borderline
Bca_GomB03g92770.mRNA1 Flavonoid ANR medium borderline
Bca_GomB04g03130.mRNA1 Flavonoid ANR medium borderline
Bca_GomB04g22060.mRNA1 Flavonoid ANR medium borderline
Bca_GomB04g22370.mRNA1 Flavonoid ANR medium borderline
Bca_GomB04g47300.mRNA1 Flavonoid ANR medium borderline
Bca_GomB04g47310.mRNA1 Flavonoid ANR medium borderline
Bca_GomB04g47320.mRNA1 Flavonoid ANR medium borderline
Bca_GomB04g47330.mRNA1 Flavonoid ANR medium borderline
Bca_GomB04g47340.mRNA1 Flavonoid ANR medium borderline
Bca_GomB04g51120.mRNA1 Flavonoid ANR medium borderline
Bca_GomB04g67710.mRNA1 Flavonoid ANR medium borderline
Bca_GomB04g71560.mRNA1 Flavonoid ANR low borderline
Bca_GomB04g75710.mRNA1 Flavonoid ANR medium borderline
Bca_GomB05g22610.mRNA1 Flavonoid ANR medium borderline
Bca_GomB05g23190.mRNA1 Flavonoid ANR medium borderline
Bca_GomB05g30020.mRNA1 Flavonoid ANR low borderline