PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

4874
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Bca_GomB05g38700.mRNA1 Flavonoid ANR low borderline
Bca_GomB05g39200.mRNA1 Flavonoid ANR low borderline
Bca_GomB05g39300.mRNA1 Flavonoid ANR low borderline
Bca_GomB05g78020.mRNA1 Flavonoid ANR medium borderline
Bca_GomB06g16750.mRNA1 Flavonoid ANR medium borderline
Bca_GomB06g16810.mRNA1 Flavonoid ANR high pass
Bca_GomB06g16820.mRNA1 Flavonoid ANR medium borderline
Bca_GomB06g16920.mRNA1 Flavonoid ANR high pass
Bca_GomB06g81980.mRNA1 Flavonoid ANR medium borderline
Bca_GomB07g27560.mRNA1 Flavonoid ANR medium borderline
Bca_GomB07g27570.mRNA1 Flavonoid ANR medium pass
Bca_GomB07g28050.mRNA1 Flavonoid ANR medium borderline
Bca_GomB07g64590.mRNA1 Flavonoid ANR medium borderline
Bca_GomB07g76170.mRNA1 Flavonoid ANR medium borderline
Bca_GomB07g78060.mRNA1 Flavonoid ANR medium pass
Bca_GomB07g78070.mRNA1 Flavonoid ANR medium pass
Bca_GomB08g41280.mRNA1 Flavonoid ANR medium borderline
Bca_GomC01g05790.mRNA1 Flavonoid ANR low borderline
Bca_GomC01g38840.mRNA1 Flavonoid ANR medium borderline
Bca_GomC02g00850.mRNA1 Flavonoid ANR medium borderline
Bca_GomC02g01010.mRNA1 Flavonoid ANR medium borderline
Bca_GomC02g08140.mRNA1 Flavonoid ANR low borderline
Bca_GomC02g09060.mRNA1 Flavonoid ANR low borderline
Bca_GomC02g23710.mRNA1 Flavonoid ANR medium borderline
Bca_GomC02g29470.mRNA1 Flavonoid ANR medium borderline
Bca_GomC02g48010.mRNA1 Flavonoid ANR medium borderline
Bca_GomC04g07380.mRNA1 Flavonoid ANR medium borderline
Bca_GomC04g27300.mRNA1 Flavonoid ANR medium borderline
Bca_GomC04g47300.mRNA1 Flavonoid ANR medium borderline
Bca_GomC04g55010.mRNA1 Flavonoid ANR medium borderline
Bca_GomC04g64290.mRNA1 Flavonoid ANR medium borderline
Bca_GomC05g10680.mRNA1 Flavonoid ANR medium borderline
Bca_GomC05g10750.mRNA1 Flavonoid ANR medium borderline
Bca_GomC05g10770.mRNA1 Flavonoid ANR medium borderline
Bca_GomC05g10780.mRNA1 Flavonoid ANR medium borderline
Bca_GomC05g18070.mRNA1 Flavonoid ANR medium borderline
Bca_GomC05g18510.mRNA1 Flavonoid ANR medium borderline
Bca_GomC05g29200.mRNA1 Flavonoid ANR medium borderline
Bca_GomC05g35340.mRNA1 Flavonoid ANR medium borderline
Bca_GomC06g12770.mRNA2 Flavonoid ANR low borderline
Bca_GomC06g42010.mRNA1 Flavonoid ANR low borderline
Bca_GomC06g46110.mRNA1 Flavonoid ANR medium borderline
Bca_GomC06g57710.mRNA1 Flavonoid ANR medium borderline
Bca_GomC07g52090.mRNA1 Flavonoid ANR low borderline
Bca_GomC07g56920.mRNA1 Flavonoid ANR medium borderline
Bca_GomC07g57890.mRNA1 Flavonoid ANR medium borderline
Bca_GomC07g61480.mRNA2 Flavonoid ANR medium pass
Bca_GomC08g03590.mRNA1 Flavonoid ANR medium borderline
Bca_GomC08g46910.mRNA1 Flavonoid ANR low borderline
Bca_GomC08g47290.mRNA1 Flavonoid ANR low borderline