PlantSME Plant secondary metabolism enzyme database

Brassica carinata (brassica_carinata)

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Imported from atlas release summary for Brassica carinata.

6327
Candidate Protein Records
4874
Pathway-Level Records
12342
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1437 22 BAHD (647) View species results
Alkaloid pathway 1112 25 SGD (196) View species results
Phenylpropanoid pathway 1029 12 POD (460) View species results
Flavonoid pathway 521 13 UFGT (304) View species results
Rosmarinic acid pathway 428 7 C4H (169) View species results
Steroid pathway 347 14 SMT1/SMT2/SMT3 (126) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 956 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Bca_GomC04g12010.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomC04g12020.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomC04g12040.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomC04g18430.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomC04g20400.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomC04g20410.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomC04g20870.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomC04g20900.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomC04g20910.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomC04g37530.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomC04g47720.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomC04g49820.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomC04g49920.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomC04g50190.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomC04g50500.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomC04g50510.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomC04g52140.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomC04g53490.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomC04g53530.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomC04g55390.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomC04g57990.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomC05g02760.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomC05g06600.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomC05g07220.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomC05g07350.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomC05g25800.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomC05g26010.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomC05g27550.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomC05g39400.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomC05g40360.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomC05g42150.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomC05g42580.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomC05g42600.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomC05g42610.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomC05g42630.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomC05g42860.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomC05g48670.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomC05g55550.mRNA1 Alkaloid 7DLGT high pass
Bca_GomC06g03280.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomC06g03290.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomC06g09570.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomC06g27540.mRNA1 Alkaloid 7DLGT high pass
Bca_GomC06g27650.mRNA1 Alkaloid 7DLGT high pass
Bca_GomC06g59390.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomC07g06350.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomC07g07540.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomC07g10610.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomC07g15420.mRNA1 Alkaloid 7DLGT medium pass
Bca_GomC07g17210.mRNA1 Alkaloid 7DLGT low borderline
Bca_GomC07g17410.mRNA1 Alkaloid 7DLGT low borderline